10030 Mitochondrial gene models imported from Genbank. MT genes (GenBank) 1 {"caption": "Genes (Ensembl)", "colour_key": "[biotype]", "default": {"MultiBottom": "collapsed_label", "MultiTop": "gene_label", "alignsliceviewbottom": "as_collapsed_label", "contigviewbottom": "transcript_label", "contigviewtop": "gene_label", "cytoview": "gene_label"}, "key": "ensembl", "label_key": "[biotype]", "multi_name": "Ensembl genes"} 10029 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 65 BWA alignments of axillary nerve RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site axillary nerve RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "axillary nerve", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 67 Spliced-read support for axillary nerve axillary nerve intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "axillary nerve", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 66 Annotation generated from axillary nerve RNA-seq data axillary nerve RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "axillary nerve", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 68 Spliced-read support for axillary nerve axillary nerve intron-spanning reads 1 \N 61 BWA alignments of bone marrow RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site bone marrow RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "bone marrow", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 63 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "bone marrow", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 62 Annotation generated from bone marrow RNA-seq data bone marrow RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "bone marrow", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 64 Spliced-read support for bone marrow bone marrow intron-spanning reads 1 \N 77 BWA alignments of brachial plexus nerve RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brachial plexus nerve RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "brachial plexus nerve", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 80 Spliced-read support for brachial plexus nerve brachial plexus nerve intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "brachial plexus nerve", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 78 Annotation generated from brachial plexus nerve RNA-seq data brachial plexus nerve RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "brachial plexus nerve", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 79 Spliced-read support for brachial plexus nerve brachial plexus nerve intron-spanning reads 1 \N 2025 BWA alignments of brain se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "brain se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9027 Spliced-read support for brain se brain se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "brain se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 90 Annotation generated from brain se RNA-seq data brain se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "brain se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5028 Spliced-read support for brain se brain se intron-spanning reads 1 \N 29 BWA alignments of brain stem RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain stem RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "brain stem", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 31 Spliced-read support for brain stem brain stem intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "brain stem", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 30 Annotation generated from brain stem RNA-seq data brain stem RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "brain stem", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 32 Spliced-read support for brain stem brain stem intron-spanning reads 1 \N 41 BWA alignments of cerebellum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site cerebellum RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "cerebellum", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 44 Spliced-read support for cerebellum cerebellum intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "cerebellum", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 42 Annotation generated from cerebellum RNA-seq data cerebellum RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "cerebellum", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 43 Spliced-read support for cerebellum cerebellum intron-spanning reads 1 \N 69 BWA alignments of cerebrum RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site cerebrum RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "cerebrum", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 72 Spliced-read support for cerebrum cerebrum intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "cerebrum", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 70 Annotation generated from cerebrum RNA-seq data cerebrum RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "cerebrum", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 71 Spliced-read support for cerebrum cerebrum intron-spanning reads 1 \N 10013 BWA alignments of DFT1 tumour biopsy RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site DFT1 tumour biopsy RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "DFT1 tumour biopsy", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10015 Spliced-read support for DFT1 tumour biopsy DFT1 tumour biopsy intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "DFT1 tumour biopsy", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10014 Annotation generated from DFT1 tumour biopsy RNA-seq data DFT1 tumour biopsy RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "DFT1 tumour biopsy", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10016 Spliced-read support for DFT1 tumour biopsy DFT1 tumour biopsy intron-spanning reads 1 \N 10018 BWA alignments of DFT1 tumour cellline RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site DFT1 tumour cellline RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "DFT1 tumour cellline", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10023 Spliced-read support for DFT1 tumour cellline DFT1 tumour cellline intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "DFT1 tumour cellline", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10020 Annotation generated from DFT1 tumour cellline RNA-seq data DFT1 tumour cellline RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "DFT1 tumour cellline", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10024 Spliced-read support for DFT1 tumour cellline DFT1 tumour cellline intron-spanning reads 1 \N 10009 BWA alignments of DFT2 tumour biopsy RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site DFT2 tumour biopsy RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "DFT2 tumour biopsy", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10011 Spliced-read support for DFT2 tumour biopsy DFT2 tumour biopsy intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "DFT2 tumour biopsy", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10010 Annotation generated from DFT2 tumour biopsy RNA-seq data DFT2 tumour biopsy RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "DFT2 tumour biopsy", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10012 Spliced-read support for DFT2 tumour biopsy DFT2 tumour biopsy intron-spanning reads 1 \N 10017 BWA alignments of DFT2 tumour cellline RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site DFT2 tumour cellline RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "DFT2 tumour cellline", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10022 Spliced-read support for DFT2 tumour cellline DFT2 tumour cellline intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "DFT2 tumour cellline", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10019 Annotation generated from DFT2 tumour cellline RNA-seq data DFT2 tumour cellline RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "DFT2 tumour cellline", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10021 Spliced-read support for DFT2 tumour cellline DFT2 tumour cellline intron-spanning reads 1 \N 21 BWA alignments of female milk RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female milk RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "female milk", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 23 Spliced-read support for female milk female milk intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "female milk", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 22 Annotation generated from female milk RNA-seq data female milk RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "female milk", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 24 Spliced-read support for female milk female milk intron-spanning reads 1 \N 2029 BWA alignments of female pbmc se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site female pbmc se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "female pbmc se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9034 Spliced-read support for female pbmc se female pbmc se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "female pbmc se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 96 Annotation generated from female pbmc se RNA-seq data female pbmc se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "female pbmc se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5032 Spliced-read support for female pbmc se female pbmc se intron-spanning reads 1 \N 17 BWA alignments of heart RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site heart RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "heart", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 20 Spliced-read support for heart heart intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "heart", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 18 Annotation generated from heart RNA-seq data heart RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "heart", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 19 Spliced-read support for heart heart intron-spanning reads 1 \N 2017 BWA alignments of heart se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site heart se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "heart se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9019 Spliced-read support for heart se heart se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "heart se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 93 Annotation generated from heart se RNA-seq data heart se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "heart se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5020 Spliced-read support for heart se heart se intron-spanning reads 1 \N 25 BWA alignments of liver RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site liver RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "liver", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 27 Spliced-read support for liver liver intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "liver", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 26 Annotation generated from liver RNA-seq data liver RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "liver", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 28 Spliced-read support for liver liver intron-spanning reads 1 \N 57 BWA alignments of lung RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site lung RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "lung", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 59 Spliced-read support for lung lung intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "lung", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 58 Annotation generated from lung RNA-seq data lung RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "lung", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 60 Spliced-read support for lung lung intron-spanning reads 1 \N 85 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "merged", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 88 Spliced-read support for merged merged intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "merged", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 86 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "merged", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 87 Spliced-read support for merged merged intron-spanning reads 1 \N 2040 BWA alignments of merged se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "merged se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9043 Spliced-read support for merged se merged se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "merged se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 91 Annotation generated from merged se RNA-seq data merged se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "merged se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5044 Spliced-read support for merged se merged se intron-spanning reads 1 \N 10025 BWA alignments of merged sp RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged sp RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "merged sp", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10028 Spliced-read support for merged sp merged sp intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "merged sp", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10026 Annotation generated from merged sp RNA-seq data merged sp RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "merged sp", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 10027 Spliced-read support for merged sp merged sp intron-spanning reads 1 \N 49 BWA alignments of optic nerve RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site optic nerve RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "optic nerve", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 52 Spliced-read support for optic nerve optic nerve intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "optic nerve", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 50 Annotation generated from optic nerve RNA-seq data optic nerve RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "optic nerve", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 51 Spliced-read support for optic nerve optic nerve intron-spanning reads 1 \N 73 BWA alignments of ovary RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ovary RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "ovary", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 75 Spliced-read support for ovary ovary intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "ovary", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 74 Annotation generated from ovary RNA-seq data ovary RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "ovary", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 76 Spliced-read support for ovary ovary intron-spanning reads 1 \N 9 BWA alignments of pancreas RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site pancreas RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "pancreas", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 11 Spliced-read support for pancreas pancreas intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "pancreas", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 10 Annotation generated from pancreas RNA-seq data pancreas RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "pancreas", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 12 Spliced-read support for pancreas pancreas intron-spanning reads 1 \N 2009 BWA alignments of peripheral nerve se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site peripheral nerve se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "peripheral nerve se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9011 Spliced-read support for peripheral nerve se peripheral nerve se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "peripheral nerve se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 97 Annotation generated from peripheral nerve se RNA-seq data peripheral nerve se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "peripheral nerve se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5012 Spliced-read support for peripheral nerve se peripheral nerve se intron-spanning reads 1 \N 9036 Spliced-read support for pooled normal 1a se pooled normal 1a se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "pooled normal 1a se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 98 Annotation generated from pooled normal 1a se RNA-seq data pooled normal 1a se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "pooled normal 1a se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5035 Spliced-read support for pooled normal 1a se pooled normal 1a se intron-spanning reads 1 \N 9038 Spliced-read support for pooled normal 1b se pooled normal 1b se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "pooled normal 1b se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 95 Annotation generated from pooled normal 1b se RNA-seq data pooled normal 1b se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "pooled normal 1b se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5039 Spliced-read support for pooled normal 1b se pooled normal 1b se intron-spanning reads 1 \N 2030 BWA alignments of sarcophilus harrisii pooled normal 1a se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site sarcophilus harrisii pooled normal 1a se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "sarcophilus harrisii pooled normal 1a se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 2060 BWA alignments of sarcophilus harrisii pooled normal 1b se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site sarcophilus harrisii pooled normal 1b se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "sarcophilus harrisii pooled normal 1b se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 45 BWA alignments of sciatic nerve RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site sciatic nerve RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "sciatic nerve", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 47 Spliced-read support for sciatic nerve sciatic nerve intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "sciatic nerve", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 46 Annotation generated from sciatic nerve RNA-seq data sciatic nerve RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "sciatic nerve", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 48 Spliced-read support for sciatic nerve sciatic nerve intron-spanning reads 1 \N 33 BWA alignments of skin RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site skin RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "skin", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 35 Spliced-read support for skin skin intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "skin", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 34 Annotation generated from skin RNA-seq data skin RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "skin", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 36 Spliced-read support for skin skin intron-spanning reads 1 \N 37 BWA alignments of spleen RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "spleen", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 40 Spliced-read support for spleen spleen intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "spleen", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 38 Annotation generated from spleen RNA-seq data spleen RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "spleen", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 39 Spliced-read support for spleen spleen intron-spanning reads 1 \N 2013 BWA alignments of spleen se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site spleen se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "spleen se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9015 Spliced-read support for spleen se spleen se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "spleen se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 94 Annotation generated from spleen se RNA-seq data spleen se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "spleen se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5016 Spliced-read support for spleen se spleen se intron-spanning reads 1 \N 53 BWA alignments of testis RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "testis", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 55 Spliced-read support for testis testis intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "testis", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 54 Annotation generated from testis RNA-seq data testis RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "testis", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 56 Spliced-read support for testis testis intron-spanning reads 1 \N 2021 BWA alignments of testis se RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site testis se RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "testis se", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 9023 Spliced-read support for testis se testis se intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "testis se", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 92 Annotation generated from testis se RNA-seq data testis se RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "testis se", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 5024 Spliced-read support for testis se testis se intron-spanning reads 1 \N 13 BWA alignments of thyroid RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site thyroid RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "thyroid", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 16 Spliced-read support for thyroid thyroid intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "thyroid", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 14 Annotation generated from thyroid RNA-seq data thyroid RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "thyroid", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 15 Spliced-read support for thyroid thyroid intron-spanning reads 1 \N 81 BWA alignments of trigeminal nerve RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site trigeminal nerve RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "group_order": "1", "row": "trigeminal nerve", "group": "ENA"}, "colour_key": "bam", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 84 Spliced-read support for trigeminal nerve trigeminal nerve intron-spanning reads 1 {"zmenu": "Supporting_alignment", "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "menu": "rnaseq", "row": "trigeminal nerve", "group": "ENA"}, "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq"} 82 Annotation generated from trigeminal nerve RNA-seq data trigeminal nerve RNA-seq gene models 1 {"zmenu": "RNASeq", "matrix": {"column": "Gene models", "menu": "rnaseq", "row": "trigeminal nerve", "group": "ENA"}, "colour_key": "human_rnaseq", "type": "rnaseq", "label_key": "RNASeq [biotype]"} 83 Spliced-read support for trigeminal nerve trigeminal nerve intron-spanning reads 1 \N