2	2008-10-18 07:39:50	repeatmask	repbase	050129	repbase	/nfs/acari/searle/progs/repmasker/RepeatMasker	1	/nfs/acari/searle/progs/repmasker/RepeatMasker	-nolow -species mammal -s	RepeatMasker	\N	RepeatMasker	repeat
3	2008-10-18 07:39:50	dust	\N	\N	\N	dust	1	tcdust	\N	Dust	\N	dust	dust
4	2008-10-18 07:39:50	trf	\N	\N	\N	trf	1	trf	\N	TRF	\N	trf	tandem_repeat
5	2008-12-02 08:17:24	human_projected_protein	\N	\N	\N	\N	\N	\N	\N	WGA2Genes	\N	\N	\N
35	2008-11-01 00:00:00	ensembl_projection	\N	\N	\N	\N	\N	\N	\N	WGA2Genes	\N	\N	\N
36	2009-01-21 15:16:21	xrefexonerateprotein	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
288	2021-01-10 15:47:20	seg	Seg	\N	\N	seg	\N	\N	\N	\N	\N	\N	\N
286	2021-01-10 15:27:00	signalp	SignalP	4.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
285	2021-01-10 15:20:38	ncoils	ncoils	2.2.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
287	2021-01-10 15:41:06	tmhmm	TMHMM	2.0c	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
355	2024-06-17 05:22:23	interpro2go	InterPro2GO	2024-05-29	\N	interpro2go	\N	\N	\N	\N	\N	\N	\N
280	2021-01-10 15:06:23	prints	PRINTS	42.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
352	2024-06-17 05:19:13	scanprosite	Prosite_patterns	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
353	2024-06-17 05:19:26	pfscan	Prosite_profiles	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
350	2024-06-17 05:17:29	pfam	Pfam	37.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
282	2021-01-10 15:08:08	tigrfam	TIGRfam	15.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
283	2021-01-10 15:08:49	superfamily	SuperFamily	1.75	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
334	2023-06-17 22:32:05	smart	Smart	9.0	\N	InterProScan	5.62-94.0	\N	\N	\N	\N	\N	\N
284	2021-01-10 15:11:57	mobidblite	MobiDBLite	2.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
277	2021-01-10 15:01:21	pirsf	PIRSF	3.10	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
279	2021-01-10 15:06:06	sfld	SFLD	4	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
58	2010-07-03 02:45:06	percentgc	\N	\N	\N	percent_gc_calc.pl	\N	\N	\N	\N	\N	percent_gc_calc.pl	density
25	2008-12-13 10:45:58	cpg	cpg	\N	\N	cpg	\N	/software/ensembl/bin/cpg	\N	CPG	\N	cpg	cpg_island
26	2008-12-13 10:45:58	eponine	Eponine	\N	\N	eponine-scan	1	/software/java/bin/java	-epojar => /usr/local/ensembl/lib/eponine-scan.jar, -threshold => 0.999	EponineTSS	\N	Eponine	TSS
27	2008-12-13 10:45:58	trnascan	trna	\N	\N	tRNAscan-SE	1.23	\N	\N	tRNAscan_SE	\N	tRNAscan	tRNA
28	2008-12-13 10:45:58	genscan	HumanIso.smat	\N	HumanIso.smat	genscan	1	genscan	\N	Genscan	\N	genscan	similarity
29	2008-12-13 10:45:58	unigene	uniuni	\N	uniuni	wutblastn	\N	wutblastn	-cpus => 1, -hitdist => 40	BlastGenscanDNA	\N	wutblastn	similarity
30	2008-12-13 10:45:58	uniprot	uniprot	\N	uniprot	wublastp	\N	wublastp	-cpus => 1, -hitdist => 40	BlastGenscanPep	\N	wublastp	similarity
31	2008-12-13 10:45:58	vertrna	embl_vertrna	\N	embl_vertrna	wutblastn	\N	wutblastn	-cpus => 1, -hitdist => 40	BlastGenscanDNA	\N	wutblastn	similarity
57	2010-07-03 02:44:28	percentagerepeat	\N	\N	\N	repeat_coverage_calc.pl	\N	\N	\N	\N	\N	repeat_coverage_calc.pl	density
43	2009-02-20 14:12:20	ncrna	Rfam	9	/lustre/scratch1/ensembl/mr6/ncRNA/BLAST	cmsearch	\N	/software/ensembl/bin/cmsearch_0.72	\N	Bio::EnsEMBL::Analysis::RunnableDB::Infernal	\N	ensembl	gene
44	2009-02-20 14:12:20	rfamblast	Rfam	\N	/lustre/scratch1/ensembl/mr6/ncRNA/BLAST/high_copy.fasta	wublastn	\N	wublastn	lowcopy => /lustre/scratch1/ensembl/mr6/ncRNA/BLAST/low_copy.fasta	Bio::EnsEMBL::Analysis::RunnableDB::BlastRfam	\N	ensembl	gene
45	2009-02-20 14:12:20	blastmirna	all_mirnas.fa	\N	/lustre/scratch1/ensembl/mr6/ncRNA/BLAST/all_mirnas.fa	wublastn	\N	wublastn	\N	Bio::EnsEMBL::Analysis::RunnableDB::BlastmiRNA	\N	ensembl	gene
68	2012-03-29 13:57:31	xrefexoneratedna	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
69	2013-04-25 14:54:35	mt_genbank_import	\N	NC_004919.1	http://www.ncbi.nlm.nih.gov/nuccore/NC_004919	\N	\N	\N	\N	\N	\N	\N	\N
70	2013-10-21 20:09:40	xrefchecksum	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
356	2024-07-22 10:07:55	goa_import	GO	\N	\N	goa_import	\N	\N	\N	\N	\N	\N	\N
358	2024-07-25 12:30:04	xref_projection	\N	\N	\N	xref_projection	\N	\N	\N	\N	\N	\N	\N
320	2023-01-25 16:05:44	cdd	CDD	3.20	\N	InterProScan	5.60-92.0	\N	\N	\N	\N	\N	\N
295	2021-07-13 16:10:42	gene3d	Gene3D	4.3.0	\N	InterProScan	5.52-86.0	\N	\N	\N	\N	\N	\N
351	2024-06-17 05:17:58	hamap	HAMAP	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
349	2024-06-17 05:15:47	hmmpanther	PANTHER	18.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
357	2024-07-25 10:47:44	alphafold	alphafold	4	/hps/scratch/flicek/ensembl/production/ensprod/alphafold_vertebrates/accession_ids.csv	\N	\N	\N	\N	\N	\N	\N	\N
354	2024-06-17 05:20:25	ncbifam	NCBIfam	14.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N