21 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}} 46 BWA alignments of brain 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site brain 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 81 Spliced-read support for brain 2 brain 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 64 Annotation generated FROM brain 2 RNA-seq data brain 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 86 Spliced-read support for brain 2 brain 2 intron-spanning reads 1 \N 38 BWA alignments of brain 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site brain 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 72 Spliced-read support for brain 3 brain 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 55 Annotation generated FROM brain 3 RNA-seq data brain 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 73 Spliced-read support for brain 3 brain 3 intron-spanning reads 1 \N 54 BWA alignments of electric organ 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site electric organ 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "eo 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 89 Spliced-read support for electric organ 1 electric organ 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "eo 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 88 Annotation generated FROM electric organ 1 RNA-seq data electric organ 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "eo 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 90 Spliced-read support for electric organ 1 electric organ 1 intron-spanning reads 1 \N 99 BWA alignments of electric organ 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site electric organ 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "eo 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 103 Spliced-read support for electric organ 2 electric organ 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "eo 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 102 Annotation generated FROM electric organ 2 RNA-seq data electric organ 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "eo 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 107 Spliced-read support for electric organ 2 electric organ 2 intron-spanning reads 1 \N 45 BWA alignments of electric organ 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site electric organ 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "eo 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 84 Spliced-read support for electric organ 3 electric organ 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "eo 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 62 Annotation generated FROM electric organ 3 RNA-seq data electric organ 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "eo 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 63 Spliced-read support for electric organ 3 electric organ 3 intron-spanning reads 1 \N 119 BWA alignments of fin 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site fin 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fin 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 122 Spliced-read support for fin 2 fin 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fin 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 120 Annotation generated FROM fin 2 RNA-seq data fin 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fin 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 121 Spliced-read support for fin 2 fin 2 intron-spanning reads 1 \N 43 BWA alignments of fin 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site fin 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fin 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 61 Spliced-read support for fin 3 fin 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fin 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 77 Annotation generated FROM fin 3 RNA-seq data fin 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fin 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 76 Spliced-read support for fin 3 fin 3 intron-spanning reads 1 \N 50 BWA alignments of flank skin 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site flank skin 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fs 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 79 Spliced-read support for flank skin 1 flank skin 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fs 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 80 Annotation generated FROM flank skin 1 RNA-seq data flank skin 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fs 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 78 Spliced-read support for flank skin 1 flank skin 1 intron-spanning reads 1 \N 135 BWA alignments of flank skin 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site flank skin 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fs 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 138 Spliced-read support for flank skin 2 flank skin 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fs 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 136 Annotation generated FROM flank skin 2 RNA-seq data flank skin 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fs 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 137 Spliced-read support for flank skin 2 flank skin 2 intron-spanning reads 1 \N 37 BWA alignments of flank skin 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site flank skin 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "fs 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 69 Spliced-read support for flank skin 3 flank skin 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "fs 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 52 Annotation generated FROM flank skin 3 RNA-seq data flank skin 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "fs 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 70 Spliced-read support for flank skin 3 flank skin 3 intron-spanning reads 1 \N 139 BWA alignments of gill 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site gill 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gill 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 141 Spliced-read support for gill 2 gill 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gill 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 140 Annotation generated FROM gill 2 RNA-seq data gill 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gill 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 142 Spliced-read support for gill 2 gill 2 intron-spanning reads 1 \N 113 BWA alignments of gill 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site gill 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gill 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 118 Spliced-read support for gill 3 gill 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gill 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 116 Annotation generated FROM gill 3 RNA-seq data gill 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gill 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 117 Spliced-read support for gill 3 gill 3 intron-spanning reads 1 \N 100 BWA alignments of gonad 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site gonad 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 104 Spliced-read support for gonad 1 gonad 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 105 Annotation generated FROM gonad 1 RNA-seq data gonad 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 108 Spliced-read support for gonad 1 gonad 1 intron-spanning reads 1 \N 31 BWA alignments of gonad 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site gonad 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 34 Spliced-read support for gonad 2 gonad 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 33 Annotation generated FROM gonad 2 RNA-seq data gonad 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for gonad 2 gonad 2 intron-spanning reads 1 \N 111 BWA alignments of gonad 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site gonad 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 115 Spliced-read support for gonad 3 gonad 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 112 Annotation generated FROM gonad 3 RNA-seq data gonad 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "gonad 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 114 Spliced-read support for gonad 3 gonad 3 intron-spanning reads 1 \N 40 BWA alignments of heart 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site heart 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "heart 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 74 Spliced-read support for heart 2 heart 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "heart 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 56 Annotation generated FROM heart 2 RNA-seq data heart 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "heart 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 59 Spliced-read support for heart 2 heart 2 intron-spanning reads 1 \N 128 BWA alignments of heart 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site heart 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "heart 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 134 Spliced-read support for heart 3 heart 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "heart 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 132 Annotation generated FROM heart 3 RNA-seq data heart 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "heart 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 133 Spliced-read support for heart 3 heart 3 intron-spanning reads 1 \N 27 BWA alignments of head skin 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site head skin 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "hs 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 30 Spliced-read support for head skin 1 head skin 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "hs 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 28 Annotation generated FROM head skin 1 RNA-seq data head skin 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "hs 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 29 Spliced-read support for head skin 1 head skin 1 intron-spanning reads 1 \N 101 BWA alignments of head skin 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site head skin 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "hs 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 106 Spliced-read support for head skin 2 head skin 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "hs 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 109 Annotation generated FROM head skin 2 RNA-seq data head skin 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "hs 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 110 Spliced-read support for head skin 2 head skin 2 intron-spanning reads 1 \N 35 BWA alignments of head skin 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site head skin 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "hs 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 51 Spliced-read support for head skin 3 head skin 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "hs 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 47 Annotation generated FROM head skin 3 RNA-seq data head skin 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "hs 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 49 Spliced-read support for head skin 3 head skin 3 intron-spanning reads 1 \N 36 BWA alignments of kidney 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site kidney 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "kid 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 67 Spliced-read support for kidney 2 kidney 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "kid 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 48 Annotation generated FROM kidney 2 RNA-seq data kidney 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "kid 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 53 Spliced-read support for kidney 2 kidney 2 intron-spanning reads 1 \N 91 BWA alignments of kidney 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site kidney 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "kid 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 94 Spliced-read support for kidney 3 kidney 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "kid 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 92 Annotation generated FROM kidney 3 RNA-seq data kidney 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "kid 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 93 Spliced-read support for kidney 3 kidney 3 intron-spanning reads 1 \N 151 BWA alignments of merged RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 154 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 153 Annotation generated FROM merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 155 Spliced-read support for merged merged intron-spanning reads 1 \N 127 BWA alignments of swim bladder 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site swim bladder 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sb 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 131 Spliced-read support for swim bladder 2 swim bladder 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sb 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 129 Annotation generated FROM swim bladder 2 RNA-seq data swim bladder 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sb 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 130 Spliced-read support for swim bladder 2 swim bladder 2 intron-spanning reads 1 \N 39 BWA alignments of swim bladder 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site swim bladder 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sb 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 71 Spliced-read support for swim bladder 3 swim bladder 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sb 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 58 Annotation generated FROM swim bladder 3 RNA-seq data swim badder 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sb 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 83 Spliced-read support for swim bladder 3 swim bladder 3 intron-spanning reads 1 \N 95 BWA alignments of spinal cord 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site spinal cord 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sc 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 98 Spliced-read support for spinal cord 2 spinal cord 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sc 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 96 Annotation generated FROM spinal cord 2 RNA-seq data spinal cord 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sc 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 97 Spliced-read support for spinal cord 2 spinal cord 2 intron-spanning reads 1 \N 42 BWA alignments of spinal cord 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site spinal cord 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sc 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 68 Spliced-read support for spinal cord 3 spinal cord 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sc 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 85 Annotation generated FROM spinal cord 3 RNA-seq data spinal cord 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sc 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 66 Spliced-read support for spinal cord 3 spinal cord 3 intron-spanning reads 1 \N 44 BWA alignments of skeletal muscle 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site skeletal muscle 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sm 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 65 Spliced-read support for skeletal muscle 1 skeletal muscle 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sm 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 87 Annotation generated FROM skeletal muscle 1 RNA-seq data skeletal muscle 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sm 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 82 Spliced-read support for skeletal muscle 1 skeletal muscle 1 intron-spanning reads 1 \N 147 BWA alignments of skeletal muscle 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site skeletal muscle 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sm 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 150 Spliced-read support for skeletal muscle 2 skeletal muscle 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sm 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 148 Annotation generated FROM skeletal muscle 2 RNA-seq data skeletal muscle 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sm 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 149 Spliced-read support for skeletal muscle 2 skeletal muscle 2 intron-spanning reads 1 \N 143 BWA alignments of skeletal muscle 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site skeletal muscle 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "sm 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 146 Spliced-read support for skeletal muscle 3 skeletal muscle 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "sm 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 144 Annotation generated FROM skeletal muscle 3 RNA-seq data skeletal muscle 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "sm 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 145 Spliced-read support for skeletal muscle 3 skeletal muscle 3 intron-spanning reads 1 \N 123 BWA alignments of spleen 1 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site spleen 1 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "spl 1"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 126 Spliced-read support for spleen 1 spleen 1 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "spl 1"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 124 Annotation generated FROM spleen 1 RNA-seq data spleen 1 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "spl 1"}, "type": "rnaseq", "zmenu": "RNASeq"} 125 Spliced-read support for spleen 1 spleen 1 intron-spanning reads 1 \N 41 BWA alignments of spleen 2 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site spleen 2 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "spl 2"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 60 Spliced-read support for spleen 2 spleen 2 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "spl 2"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 75 Annotation generated FROM spleen 2 RNA-seq data spleen 2 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "spl 2"}, "type": "rnaseq", "zmenu": "RNASeq"} 57 Spliced-read support for spleen 2 spleen 2 intron-spanning reads 1 \N 23 BWA alignments of spleen 3 RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site spleen 3 RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "spl 3"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 26 Spliced-read support for spleen 3 spleen 3 intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "spl 3"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 24 Annotation generated FROM spleen 3 RNA-seq data spleen 3 RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "spl 3"}, "type": "rnaseq", "zmenu": "RNASeq"} 25 Spliced-read support for spleen 3 spleen 3 intron-spanning reads 1 \N