1	2018-12-04 22:15:40	repeatmask_repbase_aves	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/RepeatMasker	-nolow -species "Birds" -engine "crossmatch"	HiveRepeatMasker	\N	\N	\N
2	2018-12-04 23:13:56	repeatmask_repeatmodeler	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/RepeatMasker	-nolow -lib "/hps/nobackup2/production/ensembl/genebuild/custom_repeat_libraries/repeatmodeler/species/junco_hyemalis/junco_hyemalis.repeatmodeler.fa" -engine "crossmatch"	HiveRepeatMasker	\N	\N	\N
3	2018-12-04 23:31:22	dust	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/dustmasker	\N	HiveDust	\N	\N	\N
4	2018-12-04 23:32:03	trf	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/trf	\N	HiveTRF	\N	\N	\N
5	2018-12-04 23:46:58	eponine	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/java	-epojar => /nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/opt/eponine/libexec/eponine-scan.jar, -threshold => 0.999	HiveEponine	\N	\N	\N
6	2018-12-04 23:47:12	cpg	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/cpg_lh	\N	HiveCPG	\N	\N	\N
7	2018-12-04 23:47:31	trnascan	\N	\N	\N	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/tRNAscan-SE	\N	HiveTRNAScan	\N	\N	\N
8	2018-12-04 23:50:58	genscan	HumanIso.smat	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/share/HumanIso.smat	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/genscan	\N	HiveGenscan	\N	\N	\N
9	2018-12-11 23:34:34	ensembl	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
12	2018-12-06 01:55:01	junco_hyemalis_merged_rnaseq_ise	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
18	2018-12-05 21:56:15	ncrna	\N	\N	/hps/nobackup2/production/ensembl/genebuild/blastdb/ncrna/ncrna_2016_05	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/opt/infernal10/bin/cmsearch	\N	HiveInfernal	\N	\N	\N
23	2018-12-05 20:50:20	blastmirna	\N	\N	/hps/nobackup2/production/ensembl/genebuild/blastdb/ncrna/mirbase_22/all_mirnas.fa	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastn	 -num_threads 3 	HiveBlastmiRNA	\N	\N	\N
24	2018-12-05 20:48:22	rfamblast	\N	\N	/hps/nobackup2/production/ensembl/genebuild/blastdb/ncrna/ncrna_2016_05/filtered.fasta	\N	\N	/nfs/software/ensembl/RHEL7-JUL2017-core2/linuxbrew/bin/blastn	 -num_threads 3 -word_size 12 -num_alignments 5000  -num_descriptions 5000 -max_hsps 1 	HiveBlastRfam	\N	\N	\N
29	2018-12-13 19:56:13	other_protein	uniprot	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
30	2018-12-13 19:56:13	projected_transcript	homo_sapiens_core_95_38	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
31	2019-01-12 22:36:36	xrefexoneratedna	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
32	2019-01-12 22:36:36	xrefexonerateprotein	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
33	2019-01-12 22:36:45	xrefchecksum	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N	\N
280	2023-01-25 12:55:03	cdd	CDD	3.20	\N	InterProScan	5.60-92.0	\N	\N	\N	\N	\N	\N
309	2024-06-17 05:29:41	hamap	HAMAP	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
311	2024-06-17 05:31:23	hmmpanther	PANTHER	18.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
256	2021-07-13 16:30:32	gene3d	Gene3D	4.3.0	\N	InterProScan	5.52-86.0	\N	\N	\N	\N	\N	\N
310	2024-06-17 05:30:10	pfam	Pfam	37.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
313	2024-06-17 05:32:34	pfscan	Prosite_profiles	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
241	2021-01-10 13:40:57	pirsf	PIRSF	3.10	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
236	2021-01-10 13:39:01	prints	PRINTS	42.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
312	2024-06-17 05:32:05	scanprosite	Prosite_patterns	2023_05	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N
295	2023-06-17 22:45:31	smart	Smart	9.0	\N	InterProScan	5.62-94.0	\N	\N	\N	\N	\N	\N
246	2021-01-10 13:45:27	tigrfam	TIGRfam	15.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
242	2021-01-10 13:42:04	superfamily	SuperFamily	1.75	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
243	2021-01-10 13:43:05	mobidblite	MobiDBLite	2.0	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
245	2021-01-10 13:44:49	signalp	SignalP	4.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
247	2021-01-10 13:46:22	seg	Seg	\N	\N	seg	\N	\N	\N	\N	\N	\N	\N
248	2021-01-10 13:46:30	tmhmm	TMHMM	2.0c	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
244	2021-01-10 13:44:12	ncoils	ncoils	2.2.1	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
315	2024-06-17 05:47:00	interpro2go	InterPro2GO	2024-05-29	\N	interpro2go	\N	\N	\N	\N	\N	\N	\N
318	2024-07-25 12:30:06	xref_projection	\N	\N	\N	xref_projection	\N	\N	\N	\N	\N	\N	\N
316	2024-07-22 10:07:59	goa_import	GO	\N	\N	goa_import	\N	\N	\N	\N	\N	\N	\N
239	2021-01-10 13:39:51	sfld	SFLD	4	\N	InterProScan	5.48-83.0	\N	\N	\N	\N	\N	\N
317	2024-07-25 06:24:33	alphafold	alphafold	4	/hps/scratch/flicek/ensembl/production/ensprod/alphafold_vertebrates/accession_ids.csv	\N	\N	\N	\N	\N	\N	\N	\N
314	2024-06-17 05:33:00	ncbifam	NCBIfam	14.0	\N	InterProScan	5.68-100.0	\N	\N	\N	\N	\N	\N