52 BWA alignments of brain RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 54 Spliced-read support for brain brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 53 Annotation generated FROM brain RNA-seq data brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 55 Spliced-read support for brain brain intron-spanning reads 1 \N 60 BWA alignments of female brain RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site female brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 62 Spliced-read support for female brain female brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 61 Annotation generated FROM female brain RNA-seq data female brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 63 Spliced-read support for female brain female brain intron-spanning reads 1 \N 56 BWA alignments of female gonad RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site female gonad RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 58 Spliced-read support for female gonad female gonad intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 57 Annotation generated FROM female gonad RNA-seq data female gonad RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female gonad"}, "type": "rnaseq", "zmenu": "RNASeq"} 59 Spliced-read support for female gonad female gonad intron-spanning reads 1 \N 28 BWA alignments of female liver RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site female liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 30 Spliced-read support for female liver female liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 29 Annotation generated FROM female liver RNA-seq data female liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 31 Spliced-read support for female liver female liver intron-spanning reads 1 \N 20 BWA alignments of female pituitary RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site female pituitary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "female pituitary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for female pituitary female pituitary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "female pituitary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 21 Annotation generated FROM female pituitary RNA-seq data female pituitary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "female pituitary"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for female pituitary female pituitary intron-spanning reads 1 \N 44 BWA alignments of liver in high salinity conditions RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site liver in high salinity conditions RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver in high salinity conditions"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 46 Spliced-read support for liver in high salinity conditions liver in high salinity conditions intron-spanning reads 1 \N 45 Annotation generated FROM liver high salinity RNA-seq data liver in high salinity conditions RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver in high salinity conditions"}, "type": "rnaseq", "zmenu": "RNASeq"} 47 Spliced-read support for liver in high salinity conditions liver in high salinity conditions intron-spanning reads 1 \N 40 BWA alignments of liver in low salinity conditions RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site liver in low salinity conditions RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "liver in low salinity conditions"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 42 Spliced-read support for liver in low salinity conditions liver in low salinity conditions intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "liver in low salinity conditions"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 41 Annotation generated FROM liver in low salinity conditions RNA-seq data liver in low salinity conditions RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "liver in low salinity conditions"}, "type": "rnaseq", "zmenu": "RNASeq"} 43 Spliced-read support for liver in low salinity conditions liver in low salinity conditions intron-spanning reads 1 \N 15 BWA alignments of male brain RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site male brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 18 Spliced-read support for male brain male brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 17 Annotation generated FROM male brain RNA-seq data male brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 19 Spliced-read support for male brain male brain intron-spanning reads 1 \N 36 BWA alignments of male gonad RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site male gonad RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male gonad"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 38 Spliced-read support for male gonad male gonad intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male gonad"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 37 Annotation generated FROM male gonad RNA-seq data male gonad RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male gonad"}, "type": "rnaseq", "zmenu": "RNASeq"} 39 Spliced-read support for male gonad male gonad intron-spanning reads 1 \N 22 BWA alignments of male liver RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site male liver RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 26 Spliced-read support for male liver male liver intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 25 Annotation generated FROM male liver RNA-seq data male liver RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male liver"}, "type": "rnaseq", "zmenu": "RNASeq"} 27 Spliced-read support for male liver male liver intron-spanning reads 1 \N 12 BWA alignments of male pituitary RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site male pituitary RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "male pituitary"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 14 Spliced-read support for male pituitary male pituitary intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "male pituitary"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 13 Annotation generated FROM male pituitary RNA-seq data male pituitary RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "male pituitary"}, "type": "rnaseq", "zmenu": "RNASeq"} 16 Spliced-read support for male pituitary male pituitary intron-spanning reads 1 \N 64 BWA alignments of merged RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 67 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 66 Annotation generated FROM merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 68 Spliced-read support for merged merged intron-spanning reads 1 \N 48 BWA alignments of pooled RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site pooled RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "pooled"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 50 Spliced-read support for pooled pooled intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "pooled"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 49 Annotation generated FROM pooled RNA-seq data pooled RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "pooled"}, "type": "rnaseq", "zmenu": "RNASeq"} 51 Spliced-read support for pooled pooled intron-spanning reads 1 \N 32 BWA alignments of whole body RNA-seq data. This BAM file can be downloaded FROM the Ensembl FTP site whole body RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "whole body"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 34 Spliced-read support for whole body whole body intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "whole body"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 33 Annotation generated FROM whole body RNA-seq data whole body RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "whole body"}, "type": "rnaseq", "zmenu": "RNASeq"} 35 Spliced-read support for whole body whole body intron-spanning reads 1 \N 69 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}