9 BWA alignments of blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blood RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "blood"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 11 Spliced-read support for blood blood intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "blood"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 10 Annotation generated from blood RNA-seq data blood RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "blood"}, "type": "rnaseq", "zmenu": "RNASeq"} 12 Spliced-read support for blood blood intron-spanning reads 1 \N 16 BWA alignments of brain RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site brain RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 20 Spliced-read support for brain brain intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 18 Annotation generated from brain RNA-seq data brain RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "brain"}, "type": "rnaseq", "zmenu": "RNASeq"} 19 Spliced-read support for brain brain intron-spanning reads 1 \N 21 BWA alignments of dorsal RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site dorsal RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "dorsal"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 23 Spliced-read support for dorsal dorsal intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "dorsal"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 22 Annotation generated from dorsal RNA-seq data dorsal RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "dorsal"}, "type": "rnaseq", "zmenu": "RNASeq"} 24 Spliced-read support for dorsal dorsal intron-spanning reads 1 \N 13 BWA alignments of internal organs RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site internal organs RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "internal organs"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 15 Spliced-read support for internal organs internal organs intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "internal organs"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 14 Annotation generated from internal organs RNA-seq data internal organs RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "internal organs"}, "type": "rnaseq", "zmenu": "RNASeq"} 17 Spliced-read support for internal organs internal organs intron-spanning reads 1 \N 33 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 36 Spliced-read support for merged merged intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 35 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "merged"}, "type": "rnaseq", "zmenu": "RNASeq"} 37 Spliced-read support for merged merged intron-spanning reads 1 \N 25 BWA alignments of muscle RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site muscle RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 27 Spliced-read support for muscle muscle intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 26 Annotation generated from muscle RNA-seq data muscle RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "muscle"}, "type": "rnaseq", "zmenu": "RNASeq"} 28 Spliced-read support for muscle muscle intron-spanning reads 1 \N 29 BWA alignments of retina and cochlea RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site retina and cochlea RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"column": "BAM files", "group": "ENA", "group_order": "1", "menu": "rnaseq", "row": "retina and cochlea"}, "type": "rnaseq", "zmenu": "RNASeq_bam"} 31 Spliced-read support for retina and cochlea retina and cochlea intron-spanning reads 1 {"additional_renderers": ["histogram", "Variable height"], "colour_key": "intron_support", "label_key": "", "matrix": {"column": "Intron-spanning reads", "group": "ENA", "menu": "rnaseq", "row": "retina and cochlea"}, "type": "rnaseq", "zmenu": "Supporting_alignment"} 30 Annotation generated from retina and cochlea RNA-seq data retina and cochlea RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"column": "Gene models", "group": "ENA", "menu": "rnaseq", "row": "retina and cochlea"}, "type": "rnaseq", "zmenu": "RNASeq"} 32 Spliced-read support for retina and cochlea retina and cochlea intron-spanning reads 1 \N 38 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}