29 BWA alignments of blood RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site blood RNA-seq BWA alignments 1 {"zmenu": "RNASeq_bam", "label_key": "RNASeq [biotype]", "colour_key": "bam", "matrix": {"column": "BAM files", "menu": "rnaseq", "row": "blood", "group": "ENA", "group_order": "1"}, "type": "rnaseq"} 9 Spliced-read support for blood blood intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq", "matrix": {"group": "ENA", "column": "Intron-spanning reads", "menu": "rnaseq", "row": "blood"}, "zmenu": "Supporting_alignment"} 8 Annotation generated from blood RNA-seq data blood RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "Gene models", "menu": "rnaseq", "row": "blood"}, "zmenu": "RNASeq", "type": "rnaseq"} 10 Spliced-read support for blood blood intron-spanning reads 1 \N 15 BWA alignments of dorsal feathers RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site dorsal feathers RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "BAM files", "menu": "rnaseq", "row": "dorsal feathers", "group_order": "1"}, "zmenu": "RNASeq_bam", "type": "rnaseq"} 17 Spliced-read support for dorsal feathers dorsal feathers intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq", "matrix": {"group": "ENA", "column": "Intron-spanning reads", "menu": "rnaseq", "row": "dorsal feathers"}, "zmenu": "Supporting_alignment"} 16 Annotation generated from dorsal feathers RNA-seq data dorsal feathers RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "Gene models", "menu": "rnaseq", "row": "dorsal feathers"}, "zmenu": "RNASeq", "type": "rnaseq"} 18 Spliced-read support for dorsal feathers dorsal feathers intron-spanning reads 1 \N 11 BWA alignments of internal organs RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site internal organs RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "BAM files", "menu": "rnaseq", "row": "internal organs", "group_order": "1"}, "zmenu": "RNASeq_bam", "type": "rnaseq"} 13 Spliced-read support for internal organs internal organs intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq", "matrix": {"group": "ENA", "column": "Intron-spanning reads", "menu": "rnaseq", "row": "internal organs"}, "zmenu": "Supporting_alignment"} 12 Annotation generated from internal organs RNA-seq data internal organs RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "Gene models", "menu": "rnaseq", "row": "internal organs"}, "zmenu": "RNASeq", "type": "rnaseq"} 14 Spliced-read support for internal organs internal organs intron-spanning reads 1 \N 23 BWA alignments of merged RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site merged RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "BAM files", "menu": "rnaseq", "row": "merged", "group_order": "1"}, "zmenu": "RNASeq_bam", "type": "rnaseq"} 26 Spliced-read support for merged merged intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq", "matrix": {"group": "ENA", "column": "Intron-spanning reads", "menu": "rnaseq", "row": "merged"}, "zmenu": "Supporting_alignment"} 24 Annotation generated from merged RNA-seq data merged RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "Gene models", "menu": "rnaseq", "row": "merged"}, "zmenu": "RNASeq", "type": "rnaseq"} 25 Spliced-read support for merged merged intron-spanning reads 1 \N 19 BWA alignments of ventral feathers RNA-seq data. This BAM file can be downloaded from the Ensembl FTP site ventral feathers RNA-seq BWA alignments 1 {"colour_key": "bam", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "BAM files", "menu": "rnaseq", "row": "ventral feathers", "group_order": "1"}, "zmenu": "RNASeq_bam", "type": "rnaseq"} 21 Spliced-read support for ventral feathers ventral feathers intron-spanning reads 1 {"colour_key": "intron_support", "label_key": "", "additional_renderers": ["histogram", "Variable height"], "type": "rnaseq", "matrix": {"group": "ENA", "column": "Intron-spanning reads", "menu": "rnaseq", "row": "ventral feathers"}, "zmenu": "Supporting_alignment"} 20 Annotation generated from ventral feathers RNA-seq data ventral feathers RNA-seq gene models 1 {"colour_key": "human_rnaseq", "label_key": "RNASeq [biotype]", "matrix": {"group": "ENA", "column": "Gene models", "menu": "rnaseq", "row": "ventral feathers"}, "zmenu": "RNASeq", "type": "rnaseq"} 22 Spliced-read support for ventral feathers ventral feathers intron-spanning reads 1 \N 28 For various species, proteins from UniProtKB are aligned to the genome with GeneWise. Other species proteins 1 {"protein_align_feature": {"do_not_display": "1"}}