File/Module | Location | Description |
BlastProDom.pm | iprscan/lib/Dispatcher/Tool | ProDom output parser |
Coils.pm | iprscan/lib/Dispatcher/Tool | Coils output parser |
Config.pm | iprscan/lib/Dispatcher | Interface to configuration files |
Fasta.pm | iprscan/lib/Index | Fasta sequence file indexing utilities |
FingerPrintScan.pm | iprscan/lib/Dispatcher/Tool | Prints output parser |
HMMPIR.pm | iprscan/lib/Dispatcher/Tool | PIR output parser |
HMMPanther.pm | iprscan/lib/Dispatcher/Tool | Panther output parser |
Hmm.pm | iprscan/lib/Index | HMM models informations searching utilities |
Hmmer.pm | iprscan/lib/Dispatcher/Tool | Hmmer applications output parser |
Index.pm | iprscan/lib | Generic indexing utilities |
InterPro.pm | iprscan/lib/Index | InterPro informations searching utilities |
InterProScan.pm | iprscan/lib/Dispatcher/Tool | InterProScan utilities |
InterProScanParser.pm | iprscan/lib/Dispatcher/Tool | InterProScan xml output parser |
IprMatches.pm | iprscan/lib/Index | IprMatches informations searching utilities |
PfamA.pm | iprscan/lib/Index | Pfam-A.seed file informations searching utilities |
PfamClan.pm | iprscan/lib/Index | Pfam Clan file informations searching utilities |
Prints.pm | iprscan/lib/Index | Prints informations searching utilities |
ProDomBlast3i.pl | iprscan/bin | ProDom application launcher |
ProfileScan.pm | iprscan/lib/Dispatcher/Tool | ProfileScan output parser |
Queue.pm | iprscan/lib/Dispatcher | Interface to queuing systemes |
ResubmitJobs.pl | iprscan/bin | Failed jobs resubmiting script |
ScanRegExp.pm | iprscan/lib/Dispatcher/Tool | ScanRegExp output parser |
Seg.pm | iprscan/lib/Dispatcher/Tool | Seg output parser |
SignalP.pm | iprscan/lib/Dispatcher/Tool | SignalP output parser (v1.X and higher) |
SmartDesc.pm | iprscan/lib/Index | Smart descriptions informations searching utilities |
SmartThresholds.pm | iprscan/lib/Index | Smart thresholds informations searching utilities |
SuperFamily.pm | iprscan/lib/Dispatcher/Tool | SUPERFAMILY output parser |
TMHMM.pm | iprscan/lib/Dispatcher/Tool | TMHMM output parser |
Tool.pm | iprscan/lib/Dispatcher | Base class for tools |
index_data.pl | iprscan/bin | Indexing script for data files |
iprscan_wrapper.pl | iprscan/bin | InterProScan wrapper script |
meter.pl | iprscan/bin | Percentage of jobs done |
ps_scan.pl | iprscan/bin | ProfileScan application launcher |
wget.pl | iprscan/bin | Indexes status checker and informations retriever |