#### README #### IMPORTANT: Please note you can download correlation data tables, supported by Ensembl, via the highly customisable BioMart and EnsMart data mining tools. See http://fungi.ensembl.org/biomart/martview or http://www.ebi.ac.uk/biomart/ for more information. ################## Fasta RNA dumps ################# These files hold the transcript sequences corresponding to non-coding RNA genes (ncRNA). ------------ FILE NAMES ------------ The files are consistently named following this pattern: .....fa.gz : The systematic name of the species. : The assembly build name. : The version of Ensembl Genomes from which the data was exported. : ncrna for non-coding RNA sequences * 'ncrna' - all non-coding RNA genes EXAMPLES for Human: Homo_sapiens.NCBI36.ncrna.all.fa.gz Transcript sequences for all ncRNA gene types. ------------------------------- FASTA Sequence Header Lines ------------------------------ The FASTA sequence header lines are designed to be consistent across all types of Ensembl FASTA sequences. This gives enough information for the sequence to be identified outside the context of the FASTA file. General format: >ID SEQTYPE:STATUS LOCATION GENE Example of an Ensembl RNA header: >ENST00000347977 ncrna:miRNA chromosome:NCBI35:1:217347790:217347874:-1 gene:ENSG00000195671 ^ ^ ^ ^ ^ ID | | LOCATION GENE: gene stable ID | STATUS SEQTYPE